A Parallel Genetic Algorithm for Optimizing Multicellular Models Applied to Biofilm Wrinkling

Multiscale computational models integrating sub-cellular, cellular, and multicellular levels can be powerful tools that help researchers replicate, understand, and predict multicellular biological phenomena. To leverage their potential, these models need correct parameter values, which specify cellular physiology and affect multicellular outcomes. This work presents a robust parameter optimization method, utilizing a parallel and distributed genetic-algorithm software package. A genetic algorithm was chosen because of its superiority in fitting complex functions for which mathematical techniques are less suited. Searching for optimal parameters proceeds by comparing the multicellular behavior of a simulated system to that of a real biological system on the basis of features extracted from each which capture high-level, emergent multicellular outcomes. The goal is to find the set of parameters which minimizes discrepancy between the two sets of features. The method is first validated by demonstrating its effectiveness on synthetic data, then it is applied to calibrating a simple mechanical model of biofilm wrinkling, a common type of morphology observed in biofilms. Spatiotemporal convergence of cellular movement derived from experimental observations of different strains of Bacillus subtilis colonies is used as the basis of comparison

Approach or avoidance (or both?): Integrating core self-evaluations within an approach/avoidance framework

Core self-evaluations (CSE) represent a new personality construct that,despite an accumulation of evidence regarding its predictive validity,provokes debate regarding the fundamental approach or avoidance na-ture of the construct. This set of studies sought to clarify the ap-proach/avoidance nature of CSE by examining its relation with ap-proach/avoidance personality traits and motivation constructs (Study 1);we subsequently examined approach/avoidance motivational mecha-nisms as mediators of the relation between CSE and job performance(Study 2). Overall, the studies demonstrate that CSE is best concep-tualized as representing both (high) approach tendencies and (low)avoidance tendencies; implications of these findings for CSE theoryare discussed

EFFECTS OF MANAGEMENT PRACTICES ON GRASSLAND BIRDS: LESSER PRAIRIE-CHICKEN

Information on the habitat requirements and effects of habitat management on grassland birds were summarized from information in more than 4,000 published and unpublished papers. A range map is provided to indicate the breeding distribution of Lesser Prairie-Chicken in the United States and southern Canada. Although birds frequently are observed outside the breeding range indicated, the maps are intended to show areas where managers might concentrate their attention. It may be ineffectual to manage habitat at a site for a species that rarely occurs in an area. The species account begins with a brief capsule statement, which provides the fundamental components or keys to management for the species. A section on breeding range outlines the current breeding distribution of the species in North America. The suitable habitat section describes the breeding habitat and occasionally microhabitat characteristics of the species, especially those habitats that occur in the Great Plains. Details on habitat and microhabitat requirements often provide clues to how a species will respond to a particular management practice. A table near the end of the account complements the section on suitable habitat, and lists the specific habitat characteristics for the species by individual studies. A special section on prey habitat is included for those predatory species that have more specific prey requirements. The area requirements section provides details on territory and home range sizes, minimum area requirements, and the effects of patch size, edges, and other landscape and habitat features on abundance and productivity. It may be futile to manage a small block of suitable habitat for a species that has minimum area requirements that are larger than the area being managed. The Brown-headed Cowbird (Molothrus ater) is an obligate brood parasite of many grassland birds. The section on cowbird brood parasitism summarizes rates of cowbird parasitism, host responses to parasitism, and factors that influence parasitism, such as nest concealment and host density. The impact of management depends, in part, upon a species’ nesting phenology and biology. The section on breeding-season phenology and site fidelity includes details on spring arrival and fall departure for migratory populations in the Great Plains, peak breeding periods, the tendency to renest after nest failure or success, and the propensity to return to a previous breeding site. The duration and timing of breeding varies among regions and years. Species’ response to management summarizes the current knowledge and major findings in the literature on the effects of different management practices on the species. The section on management recommendations complements the previous section and summarizes specific recommendations for habitat management provided in the literature. If management recommendations differ in different portions of the species’ breeding range, recommendations are given separately by region. The literature cited contains references to published and unpublished literature on the management effects and habitat requirements of the species. This section is not meant to be a complete bibliography; a searchable, annotated bibliography of published and unpublished papers dealing with habitat needs of grassland birds and their responses to habitat management is posted at the Web site mentioned below

Effects of Management Practices on Grassland Birds: Sprague’s Pipit

Sprague’s Pipit (Anthus spragueii): Breeding range Suitable habitat Area requirements Brown-headed Cowbird brood parasitism Breeding-season phenology and site fidelity Species’ response to management Management Recommendations Habitat Characteristic

Effects of Management Practices on Grassland Birds: Sprague’s Pipit

Sprague’s Pipit (Anthus spragueii): Breeding range Suitable habitat Area requirements Brown-headed Cowbird brood parasitism Breeding-season phenology and site fidelity Species’ response to management Management Recommendations Habitat Characteristic

Effects of Management Practices on Grassland Birds: Grasshopper Sparrow

Grasshopper Sparrow (Ammodramus savannarum): Breeding range Suitable habitat Area requirements Brown-headed Cowbird brood parasitism Breeding-season phenology and site fidelity Species’ response to management Management Recommendations Habitat Characteristic

Effects of Management Practices on Grassland Birds: Field Sparrow

Field Sparrow (Spizella pusilla): Breeding range Suitable habitat Area requirements Brown-headed Cowbird brood parasitism Breeding-season phenology and site fidelity Species’ response to management Management Recommendations Habitat Characteristic

Effects of Management Practices on Grassland Birds: Grasshopper Sparrow

Grasshopper Sparrow (Ammodramus savannarum): Breeding range Suitable habitat Area requirements Brown-headed Cowbird brood parasitism Breeding-season phenology and site fidelity Species’ response to management Management Recommendations Habitat Characteristic

Effects of Management Practices on Grassland Birds: Burrowing Owl

Burrowing Owl ( Speotyto cunicularia hypugaea): Breeding range Suitable habitat Prey habitat Area requirements Brown-headed Cowbird brood parasitism Breeding-season phenology and site fidelity Species’ response to management Management Recommendations Characteristic